Package: heatmap4 0.1.3
heatmap4: Simple Heatmap Function
A color image of a numerical matrix. A dendrogram can be added to the left side and to the top. This package takes the original heatmap function and reduces the argument complexity.
Authors:
heatmap4_0.1.3.tar.gz
heatmap4_0.1.3.zip(r-4.5)heatmap4_0.1.3.zip(r-4.4)heatmap4_0.1.3.zip(r-4.3)
heatmap4_0.1.3.tgz(r-4.4-any)heatmap4_0.1.3.tgz(r-4.3-any)
heatmap4_0.1.3.tar.gz(r-4.5-noble)heatmap4_0.1.3.tar.gz(r-4.4-noble)
heatmap4_0.1.3.tgz(r-4.4-emscripten)heatmap4_0.1.3.tgz(r-4.3-emscripten)
heatmap4.pdf |heatmap4.html✨
heatmap4/json (API)
# Install 'heatmap4' in R: |
install.packages('heatmap4', repos = c('https://rituroy.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rituroy/heatmap4/issues
Last updated 11 months agofrom:d8f11025a1. Checks:OK: 1 WARNING: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 04 2024 |
R-4.5-win | WARNING | Nov 04 2024 |
R-4.5-linux | WARNING | Nov 04 2024 |
R-4.4-win | WARNING | Nov 04 2024 |
R-4.4-mac | WARNING | Nov 04 2024 |
R-4.3-win | WARNING | Nov 04 2024 |
R-4.3-mac | WARNING | Nov 04 2024 |
Exports:cutClustergenerate_heatmapgetClustergetCosineDistgetDistgetKappaDistheatmapColorBarsampleColorLegend
Dependencies:
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Gene amplification status | amplifDat |
Gene information | anno |
Chromosomal information | chrInfo |
Calibration bar for color images. | colorBar |
Cluster designation. | cutCluster |
Generate a Heat Map. | generate_heatmap |
Gene expression data | genomDat |
Hierarchical cluster analysis based on various distance methods. | getCluster |
Cosine distance based distance matrix. | getCosineDist |
Returns a distance matrix. | getDist |
Cohen's kappa coefficient based distance matrix. | getKappaDist |
Heatmap internal function. | heatmap4 |
Returns a color bar. | heatmapColorBar |
Phenotypic (patient information) data | phen |
rect.hclust.my. | rect.hclust.my |
Returns a legend. | sampleColorLegend |