1. Introduction | 2. Loading heatmap4 package | 3. Example Data | 4. Generate Heatmap | 5. More
Package: heatmap4 0.1.8
heatmap4: Simple Heatmap Function
A color image of a numerical matrix. A dendrogram can be added to the left side and to the top. This package takes the original heatmap function and reduces the argument complexity.
Authors:
heatmap4_0.1.8.tar.gz
heatmap4_0.1.8.zip(r-4.7-any)heatmap4_0.1.8.zip(r-4.6-any)heatmap4_0.1.8.zip(r-4.5-any)
heatmap4_0.1.8.tgz(r-4.6-any)heatmap4_0.1.8.tgz(r-4.5-any)
heatmap4_0.1.8.tar.gz(r-4.7-any)heatmap4_0.1.8.tar.gz(r-4.6-any)
heatmap4_0.1.8.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
heatmap4/json (API)
| # Install 'heatmap4' in R: |
| install.packages('heatmap4', repos = c('https://rituroy.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rituroy/heatmap4/issues
Datasets:
Last updated from:80c97dc10b. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 103 | ||
| source / vignettes | OK | 218 | ||
| linux-release | OK | 125 | ||
| macos-release | OK | 152 | ||
| macos-oldrel | OK | 153 | ||
| windows-devel | OK | 69 | ||
| windows-release | OK | 97 | ||
| windows-oldrel | OK | 89 | ||
| wasm-release | OK | 203 |
Exports:cutClustergenerate_heatmapgetClustergetCosineDistgetDistgetKappaDistheatmap4heatmapColorBarsampleColorLegend
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Gene amplification status | amplifDat |
| Gene information | anno |
| Chromosomal information | chrInfo |
| Calibration bar for color images. | colorBar |
| Cluster designation. | cutCluster |
| Generate a Heat Map. | generate_heatmap |
| Gene expression data | genomDat |
| Hierarchical cluster analysis based on various distance methods. | getCluster |
| Cosine distance based distance matrix. | getCosineDist |
| Returns a distance matrix. | getDist |
| Cohen's kappa coefficient based distance matrix. | getKappaDist |
| Heatmap internal function. | heatmap4 |
| Returns a color bar. | heatmapColorBar |
| Phenotypic (patient information) data | phen |
| rect.hclust.my. | rect.hclust.my |
| Returns a legend. | sampleColorLegend |